Carnegie Mellon University

Recent Publications

A. Klimas, B. Gallagher, P. Wijesekara, S. Fekir, E. F. DiBernardo, Z. Cheng, D. Stolz, F. Cambi, S. Watkins, S. L. Brody, A. Horani, A. L. Barth, C. Moore, X. Ren, Y. Zhao*. Magnify is a universal molecular anchoring strategy for expansion microscopy. Nature Biotechnology published 02 Jan. 2023.

Koh ZH, Bishop WE, Kawashima T, Jeon BB, Srinivasan R, Kuhlman SJ, Ahrens MB, Chase SM, Yu BM Dimensionality reduction of calcium-imaged neuronal population activity. Nature Computational Science 2022 Dec 29. doi: 10.1038/s43588-022-00390-2.

F. Han, S. Gu, A. Klimas, N. Zhao, Y. Zhao* (co-corresponding), S-C, Chen*. Three-dimensional nanofabrication via ultrafast laser patterning and kinetically regulated material assembly. Science, 2022, 378, 6626. doi: 10.1126/science.abm8420.

Jeon BB, Fuchs, T, Chase SM, Kuhlman SJ. Visual experience has opposing influences on the quality of stimulus representation in adult primary visual cortex. eLife 2022 Nov 2;11:e80361. doi: 10.7554/eLife.80361. PMID: 36321876.

Szent-Gyorgyi C, Perkins LA, Schmidt BF, Liu Z, Bruchez MP, van de Weerd R. Bottom-Up Design: A Modular Golden Gate Assembly Platform of Yeast Plasmids for Simultaneous Secretion and Surface Display of Distinct FAP Fusion Proteins. ACS Synth Biol. 2022 Oct 19. doi: 10.1021/acssynbio.2c00283. Online ahead of print.

LaPeruta AJ, Micic J, Woolford JL Jr. Additional principles that govern the release of pre-ribosomes from the nucleolus into the nucleoplasm in yeast. Nucleic Acids Res. 2022 Jun 23:gkac430. doi: 10.1093/nar/gkac430. Epub ahead of print. PMID: 35736211

Cui X, Xue Y, McCormack C, Garces A, Rachman TW, Yi Y, Stolzer M, Durand D. Simulating domain architecture evolution. Bioinformatics. 2022 Jun 24;38(Suppl 1):i134-i142. doi: 10.1093/bioinformatics/btac242. PMID: 35758772; PMCID: PMC9236583.

Jeon BB, Fuchs T, Chase SM, Kuhlman SJ. Existing function in primary visual cortex is not perturbed by new skill acquisition of a non-matched sensory task. Nature Communication. 2022 Jun 25;13(1):3638. doi: 10.1038/s41467-022-31440-y.

L. Shi, A. Klimas, B. Gallagher, Z. Cheng, F. Fu, P. Wijesekara, Y. Miao, X. Ren, Y Zhao* (co-corresponding author), W Min*. Super-resolution vibrational imaging using expansion stimulated Raman scattering microscopy. Advanced Science, 2022, 2200315. doi: 10.1002/advs.202200315.

A. Abdelfattah, S. Ahuja, T. Akkin, S.R. Allu, D.A. Boas, J. Brake, E.M. Buckley, ..., Y. Zhao. Neurophotonic tools for microscopic measurements and manipulation: status report. Neurophotonics, 2022, 9 (S1), 013001 [Review]. doi: 10.1117/1.NPh.9.S1.013001.

Crosby D, Mikolaj MR, Nyenhuis SB, Bryce S, Hinshaw JE, Lee TH. Reconstitution of human atlastin fusion activity reveals autoinhibition by the C terminus. J Cell Biol. 2022 Feb 7;221(2):e202107070. doi: 10.1083/jcb.202107070. Epub 2021 Nov 24. PMID: 34817557

Spix TA, Nanivadekar S, Toong N, Kaplow IM, Isett BR, Goksen Y, Pfenning AR, Gittis AH. Population-specific neuromodulation prolongs therapeutic benefits of deep brain stimulation. Science. 2021 Oct 8;374(6564):201-206. doi: 10.1126/science.abi7852. Epub 2021 Oct 7. PMID: 34618556

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