2012 Graduates

Akanksha Bhardwaj
Data Scientist at Adometry in Austin, Texas

David Hamilton
Software Engineer at Windows Division, Microsoft in Redmond, Washington

Yutong Li
Quality Engineer at Microstrategy in Tysons Corner, Virginia

Songdet Nillasithanukroh
Software Engineer at TripAdvisor in Boston

Jinxue Zhou
Software Engineer at NetApp in Pittsburgh

2011 Graduates

Walter J. Lewis
Modeling Gene Expression: Understanding the Effects of Transcription Factor Binding Site Arrangement on Gene Expression in the Sea Star
Advisor: Dr. Veronica Hinman

Anish Chakka
Senior Software Developer at Dr. Uma Chandran's Laboratory, Department of Biomedical Informatics, University of Pittsburgh

Naveen Chandramohan
Sequencing Technologies Division, Lawrence Berkeley National Laboratory in California

William Foran
Data Coordinator/Analyst at Neurocognitive Development Lab, Department of Psychiatry, University of Pittsburgh Medical Center

Ajay Harikrishna
Application Developer at Highmark in Pittsburgh

Philip Davidson
A Method for Identifying Conformational Sub-states in Monte Carlo Simulations of Proteins with Applications to Decoy Detection and the Analysis of Conformational Landscapes
Student in the Ph.D. in Biological Sciences Program at Carnegie Mellon University

Xian Feng
Visualizing Virus Self-assembly Simulation with GPU Acceleration
Advisor: Russell S. Schwartz, Ph.D.
Research Programmer at Dr. Russell Schwartz's Lab, Carnegie Mellon University

Jesse Stokum
Functional Network Connectivity in Patients with Left Temporal Lobe Epilepsy
Advisors: William H. Theodore, M.D. and William D. Gaillard, M.D., NIH
Student in the M.D./Ph.D. Program at the University of Maryland

Sriram Venugopal
Software Development Engineer at Amazon formerly at Audax Health

Jorge A. Vendries Algarin

2010 Graduates

Jeya Balaji Balasubramanian

James Dang

Vardhan Dharnidharka
Financial Software Developer at Bloomberg LP

Swetha Garimalla
Bioinformatics Specialist at the University of Arkansas

Rupinder Khandpur
Fast Parameter Synthesis in Agent-based Models Using Abstraction Refinement
Advisor: Christopher J. Langmead, Ph.D.
Research Programmer at Dr. Russell Schwartz's Lab, Carnegie Mellon University

Cheng-Neng Ko
Financial Software Developer at Bloomberg LP

M. Senthil Kumar
The Equilibrium and Non-Equilibrium Dynamics of Self-Assembly Systems
Advisors: Russell S. Schwartz, Ph.D. and Markus Deserno, Ph.D.

Soumya Luthra
University of Pittsburgh Cancer Institute

Shannon Quinn
Waldo: A Framework for Inferring Protein Location as a Function of Condition
Advisor: Robert F. Murphy, Ph.D.
Student in the Ph.D. in Computational Biology Program at Carnegie Mellon/University of Pittsburgh

Chuang Wu

2009 Graduates

Arshi Arora
Health Sciences Fellow at the Faeder Lab, University of Pittsburgh

Ivan Cao-berg
SLML Level 1.0: Communicating Subcellular Location Protein Patterns for Systems Biology
Advisor: Robert Murphy

Jen-Hao Cheng

Katherine D'Aco
Association Testing Using Local SNP Phylogenies
Advisor: Russell Schwartz

Joshua Earl
Director of Bioinformatics at the Center for Genomic Sciences, Allegheny General Hospital

Donghun Lee
Student in the Ph.D. Program at Princeton University

Yaw Nti-Addae
Inferring Gene Interactions in Lung and Breast Cancers Through Gene Regulatory Networks Assisted by Prior Knowledge
Advisor: Russell Schwartz
Scientific Analyst at Dow AgroSciences

Vamsee Pillalamarri

Balamuruganand Selvaraj
Computational Biology Analyst at Flybase Group, Indiana University in Bloomington

Irtisha Singh
Systems and Structural Biology in HIV-1 Drug Discovery
Advisor: Judith Klein Seetharaman
Student in the Ph.D. in Computational Biology and Medicine Program at Cornell University, Weil Cornell Medical College and Memorial Sloan Kettering Cancer Center formerly a Bioinformatics Analyst at the Department of Biomedical Informatics, University of Pittsburgh.

Rohini Sinha
Bioinformatician at the University of Pennsylvania

Gregory Smith
Candidate in the Ph.D. in Biological Sciences Program at Carnegie Mellon University

Shreedharan Sriram
Computational Biologist at Dow Agrosciences

Arpit Tandon
Numerical Modeling of the Immune Cell Deformation Caused by the Anti-cancer Compound Paclitaxel
Advisor: Ivan Viktorovich Maly, University of Pittsburgh

2008 Graduates

Lindy Briggs

Jessica McGillen
Differential Equations Modeling of Long-term HIV Infection in Untreated Patients
Advisor: Shlomo Ta'asan
Student in the Ph.D. Program at Oxford University

Yongjin Park
Gene Expression Analyses by Statistical Learning Methods
Advisor: Russell S. Schwartz

Dmitriy Patek

Ayush Raman
Bioinformatics Scientist at the Institute for Systems Biology

2007 Graduates

Aaron Huttner

Robert Montgomery
Venter Institute

2006 Graduates

Amina Abdullah

Jacob Joseph
Candidate in the Ph.D. in Computational Biology Program at Carnegie Mellon/University of Pittsburgh

Aly Khan
Columbia University

Prateek Kumar
Venter Institute

Bormi Shin

Swapnil Upganlawar

2005 Graduates

Ka-Young An

Akshay Lalla
Celerant Consulting

Peter M. Zullo

2004 Graduates

Neil Christopher

Alexander Mandel

Kiran Raju Penumacha

Joyce Wei

Peter Zullo

2001 Graduates

Akira Hasegawa

Edward Roques

2012 Graduates

Stephanie Hughes

Cassandra Priddy

Andrew Markham

2011 Graduates

Mark Deblois

James Hughes

Sailatha Ravi

Nathan Hsu

Ashita Magal Prakash

Jesse J. Sheehan

2010 Graduates

Megha Kapur

Joseph King
Life Sciences Instructor at West Point Military Academy

2009 Graduates

Saksham Chandra
Student in Ph.D. in Statistics Program at Penn State University

Nicole Marthaler
Science Writing

Mohammed Qureshi
Student in the Ph.D. Program at Kent State University

2008 Graduates

Margarida Nunes Ferreira Silva Coelho Rodrigues dos Anjos

Dara Brown
Student at the University of Pennsylvania, School of Veterinary Medicine

2007 Graduates

Christopher Fried

2006 Graduates

Yanhua Hu

Arun Krishnaswamy

2005 Graduates

Jeong-Ah Kwon

2004 Graduates

Nicole R. Brandon

2002 Graduates

Sugunda Sharma

2000 Graduates

Lisa Hennen