Publications
The manuscript copies are provided for patients and educational fair use. Most of the copies are preproduction versions. Please contact the publishers for other inquiries and complete versions.
2013
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High-speed three-dimensional characterization of fluid flows induced by micro-objects in deep microchannels |
pdf |
BioChip Journal, in press |
Chen and Pekkan |
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Guest Editorial: Special Issue on Fetal Hemodynamics, Developmental Fetal Cardiovascular Biomechanics in the 21st Century |
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Cardiovascular Engineering and Technology, in press |
Pekkan and Keller |
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Critical transitions in early embryonic aortic arch patterning and hemodynamics |
pdf |
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Kowalski, Dur, et. al. |
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Patient-specific hemodynamic performance of Fontan conversion templates: Lateral tunnel vs. intra-atrial with fenestration |
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Cardiology in the Young, in press |
Hong, Dur, et. al. |
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Time-resolved OCT-μPIV: A new microscopic PIV technique for noninvasive depth-resolved pulsatile flow profile acquisition |
pdf |
Experiments in Fluids, 54:1426 |
Chen, Menon, et. al. |
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Computer modeling for the prediction of thoracic aortic stent graft collapse |
pdf |
Journal of Vascular Surgery, in press |
Pasta, Chod, et. al. |
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Characterization of neonatal aortic cannula jet flow regimes for improved cardiopulmonary bypass |
pdf |
Journal of Biomechanics, 46(2):362-72 |
Menon, Teslovich, et. al. |
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Pre-Surgical Evaluation of Fontan Connection Options for Patients with Apicocaval Juxtaposition, using Computational Fluid Dynamics |
pdf |
Artificial Organs, 37(1):E1-8 |
Menon, Yoshida, Pekkan |
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Variability of CFD Solutions for Pressure and Flow in a Giant Aneurysm: The SBC2012 CFD Challenge |
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Journal of Biomechanical Engineering, in press |
Steinman, et. al. |
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Novel fenestration designs for controlled venous flow shunting in failing Fontans with systemic |
pdf |
Artificial Organs, 37(1):66-75 |
Priti, Menon, et. al. |
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Total cavopulmonary connection for patients with apicocaval juxtaposition: Consideration about the optimal route of conduit using preoperative angiography and flow simulation |
pdf |
European Journal of Cardiovascular Surgery, in press |
Yoshida, et.al. |
2012
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Computational hemodynamic optimization predicts dominant aortic arch selection is driven by embryonic outflow tract orientation in the chick embryo |
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Biomechanics and Modeling in Mechanobiology, 11(7):1057:73 |
Kowalski, Teslovich, et. al. |
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Visualization of flow structures in Fontan patients using 3-dimensional phase contrast magnetic resonance imaging |
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Journal of Thoracic and Cardiovascular Surgery, 143(5):1108-16 |
Sundareswaran, Haggerty, et. al. |
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Istanbul symposium on neonatal and pediatric cardiopulmonary bypass procedures |
pdf |
Artificial Organs, 36(5):463-6 |
Ündar A, Alkan-Bozkaya, et. al. |
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Mechanotransduction in embryonic vascular development |
pdf |
Biomechanics and Modeling in Mechanobiology, 11(8):1149-68 |
Pekkan and Roman |
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Pulsatile venous waveform quality in Fontan circulation Clinical implicatons, venous assist options and the future |
pdf |
The Anatolian Journal of Cardiology, 12(5):420-6 |
Kocyildirim, Dur, et. al. |
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Cannulation strategy for aortic arch reconstruction using deep hypothermic circulatory arrest |
pdf |
Annals of Thoracic Surgery, 94(2):614-20 |
deZelicourt, Jung, et. al. |
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Pulsatile venous waveform quality affects the conduit performance in functional and ''failing'' Fontan circulations |
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Cardiology in the Young, 22(3):251-62 |
Dur, Kocyildirim, et. al. |
2011
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Analysis of early embryonic great-vessel microcirculation in Zebrafish using high-speed confocal µPIV |
pdf |
Biorheology, 48(5):305-21 |
Chen, Patrick, et. al. |
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Hemodynamics of the hepatic venous three-vessel confluences using particle image velocimetry |
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Annals of Biomedical Engineering, 39(9):2398-416 |
Lara, Chen, et. al. |
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Cellular level near-wall unsteadiness of high-hematocrit erythrocyte flow using confocal microPIV |
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Experiments in Fluids, 50(4): 887-904 |
Patrick, Chen, et.al. |
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Right ventricular outflow tract reconstruction with bicuspid valved polytetrafluoroethylene conduit |
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Annals of Thoracic Surgery, 91(4):1235-9 |
Yoshida, Wearden, et.al. |
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Interaction between alk1 and blood flow in development of arteriovenous malformations |
pdf |
Development, 138(8):1573-82 |
Corti, Young, et.al. |
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Computer-aided patient-specific coronary artery graft design improvements using CFD coupled shape optimizer |
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Cardiovascular Engineering and Technology, 2(1): 35-47 |
Dur, Coskun, et.al. |
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Pulmonary hepatic flow distribution in total cavopulmonary connections: extracardiac versus intracardiac |
pdf |
Journal of Thoracic and Cardiovascular Surgery,141(1):207-14 |
Dasi, Whitehead, et. al. |
2010
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In vitro evaluation of right ventricular outflow tract reconstruction with bicuspid valved polytetrafluoroethylene conduit |
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Artificial Organs, 34(11):1010-1016 |
Dur, Yoshida, et.al. |
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Optimization of inflow waveform phase-difference for minimized total cavopulmonary power loss |
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ASME Journal of Biomechanical Engineering, 132(3):031012 |
Dur, DeGroff, et.al. |
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Mechanobiology and the microcirculation: cellular, nuclear and fluid mechanics |
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Microcirculation, 17(3):179-91 |
Dahl, Kalinowski, Pekkan |
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Three-Dimensional chemical profile manipulation using two-dimensional autonomous microfluidic control |
pdf |
Journal of the American Chemical Society, 132(4):1339-47 |
Y. Kim, Pekkan, Messner, LeDuc |
2009
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Pulsatile in vitro simulation of pediatric univentricular circulation for the evaluation of cardiopulmonary assist scenarios |
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Artificial Organs, 33(11):967-976 |
Dur, Lara et.al. |
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Aortic arch morphogenesis and flow modeling in the chick embryo |
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Annals of Biomedical Engineering,37(6):1069-81 |
Wang, Dur, et.al. |
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Hemodynamic performance of stage-2 univentricular reconstruction: Glenn vs. hemi-Fontan templates |
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Annals of Biomedical Engineering, 37(1):50-63 |
Pekkan, Dasi, et.al. |
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Mitral Web - A new concept for mitral valve repair: improved engineering design and in-vitro studies |
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Journal of Heart Valve Disease, 18 (3): 300-6 |
Erek, Padala, et.al. |
2008
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Patient-specific surgical planning and hemodynamic computational fluid dynamics optimization through free-form haptic anatomy editing tool (SURGEM) |
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Medical & biological engineering & computing, 46(11):1139-52 |
Pekkan, Withed, et.al. |
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The total cavopulmonary connection resistance: A significant impact on single ventricle hemodynamics at rest and exercise |
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American Journal of Physiology (Heart Circ Physiol), 295(6): H2427-35 |
Sundareswaran, Pekkan, et.al. |
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Modified control grid interpolation for the volumetric reconstruction of fluid flows |
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Experiments in Fluids, 45(6): 987-97 |
Frakes, Pekkan, et.al. |
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Neonatal aortic arch hemodynamics and perfusion during cardiopulmonary bypass |
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Journal of Biomechanical Engineering, 130 (6): 120-32 |
Pekkan, Dur, et.al. |
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Functional analysis of Fontan energy dissipation
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Journal of Biomechanics, 41 (10): 2246-2252 |
Dasi, Pekkan, et.al. |
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In vitro hemodynamic investigation of the embryonic aortic arch at late gestation
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Journal of Biomechanics, 41 (8): 1697-1706 |
Pekkan, Dasi, et.al. |
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Quantitative analysis of extracardiac versus intraatrial Fontan anatomic geometries
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Annals of Thoracic Surgery, 85 (3): 810-817 |
Krishnankutty, Dasi , et.al. |
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A new method for registration-based medical image interpolation
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IEEE Transactions on Medical Imaging, 27 (3): 370-377 |
Frakes, Dasi , et.al. |
2007
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Nonlinear power loss during exercise in single-ventricle patients after the Fontan: insights from computational fluid dynamics |
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Circulation, 116 (11 Suppl): I165-I171 |
Whitehead, Pekkan, et.al. |
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Progress in the CFD modeling of flow instabilities in anatomical total cavopulmonary connections |
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Annals of Biomedical Engineering, 35 (11): 1840-1856 |
Wang, Pekkan, et.al. (Results featured on the cover illustration) |
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Introduction of a new optimized total cavopulmonary connection
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Annals of Thoracic Surgery, 83 (6): 2182-2190 |
Soerensen, Pekkan, et.al. |
2006
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Flow study of an extracardiac connection with persistent left superior vena cava |
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Journal of Thoracic and Cardiovascular Surgery,131 (4): 785-789 |
de Zélicourt , Pekkan, et.al. (Results featured on the cover illustration) |
2005
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Coupling pediatric ventricle assist devices to the Fontan circulation: simulations with a lumped-parameter model |
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ASAIO Journal, 51 (5): 618-628 |
Pekkan, Frakes, et.al. |
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Total cavopulmonary connection flow with functional left pulmonary artery stenosis: angioplasty and fenestration in vitro |
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Circulation, 112 (21): 3264-3271 |
Pekkan, Kitajima, et.al. |
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In vitro flow analysis of a patient-specific intraatrial total cavopulmonary connection |
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Annals of Thoracic Surgery, 79 (6): 2094-2102 |
de Zélicourt , Pekkan, et.al. |
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Single-step stereolithography of complex anatomical models for optical flow measurements |
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Journal of Biomechanical Engineering, 127 (1): 204-207 |
de Zélicourt , Pekkan, et.al. |
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Physics-driven CFD modeling of complex anatomical cardiovascular flows-a TCPC case study |
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Annals of Biomedical Engineering, 33 (3): 264-300 |
Pekkan, de Zélicourt, et.al. |
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Three-dimensional velocity field reconstruction |
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Journal of Biomechanical Engineering, 126 (6): 727-735 |
Frakes, Smith, et.al. |
2004
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The effects of different mesh generation methods on computational fluid dynamic analysis and power loss assessment in total cavopulmonary connection |
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Journal of Biomechanical Engineering, 126 (5): 594-603 |
Liu, Pekkan, et.al. |
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Oscillating Couette flow for in vitro cell loading |
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Journal of Biomechanics, 37 (6): 939-942 |
Nalim, Pekkan, et.al. |
2003
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Two-dimensional flow and NOx emissions in deflagrative internal combustion wave rotor configurations |
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Journal of Engineering for Gas Turbines and Power,125 (3): 720-733 |
Pekkan, Nalim |
1998
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Computer aided design and five-axis milling of centrifugal impellers |
pdf |
Heating Ventilating and Piping Journal (Tesisat Dergisi), 34 (3): 197-204 |
Pekkan, Eralp (in turkish) |
